About the atlas

Welcome to The Atlas of Human Germline Transposable Elements

version 0.1

This visualizer was created based on published bulk RNA-seq datasets and single cell RNA-seq datasets (10x Genomics) with the purpose of enabling a broad audience to explore transposable element (TE) and gene expression profiles from undifferentiated human embryonic stem cells (hESCs), differentiated cells and human Primordial Germ Cell Like Cells (hPGCLCs). At this portal, visitors can freely use the provided datasets to interactively explore how in vitro male and female human germline cells called hPGCLCs undergo transcriptional changes at TE’s and genes during differentiation.

Current Datasets

Bulk RNA-seq dataset
Single Cell RNA-seq dataset